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PyG Benchmark

Graph Property Prediction

ogbg-molhiv

Trick GCN GIN
0.7690 ± 0.0053 0.7778 ± 0.0130
+Virtual Node 0.7581 ± 0.0135 0.7713 ± 0.0036
+FLAG 0.7627 ± 0.0124 0.7764 ± 0.0083
+Random Feature 0.7743 ± 0.0134 0.7692 ± 0.0065
Random Forest + Fingerprint 0.8218 ± 0.0022 --

ogbg-ppa

Trick GCN GIN
0.6787 ± 0.0091 0.6833 ± 0.0087
+Virtual Node 0.6747 ± 0.0060 0.6901 ± 0.0277

Node Property Prediction

ogbn-arxiv

Trick GCN SAGE
0.7167 ± 0.0022 0.7167 ± 0.0025
+FLAG 0.7187 ± 0.0020 0.7206 ± 0.0013
+Label Propagation 0.7212 ± 0.0006 0.7197 ± 0.0020
+Correct & Smooth 0.7220 ± 0.0037 0.7264 ± 0.0004

ogbn-collab

Trick GCN SAGE
0.4763 ± 0.0279 0.5171 ± 0.0100
+Common Neighbors 0.5422 ± 0.0023 0.5368 ± 0.0020
+Resource Allocation 0.5033 ± 0.0142 0.5093 ± 0.0055
+Adamic Adar 0.5345 ± 0.0023 0.5376 ± 0.0010
+AnchorDistance 0.4605 ± 0.0120 0.4553 ± 0.0237